Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | YT1_RS18025 | Not Available | Negative | 3695663 - 3696958 | 44661.3 |
| fadr/gntr family transcriptional regulator | YT1_RS18030 | Not Available | Positive | 3697014 - 3697679 | 23784.2 |
| tigr02569 family protein | YT1_RS18035 | Not Available | Negative | 3697692 - 3698546 | 31074.0 |
| adenylyltransferase/sulfurtransferase moez | YT1_RS18040 | Not Available | Negative | 3698640 - 3699824 | 42425.1 |
| duf3152 domain-containing protein | YT1_RS18045 | Not Available | Negative | 3699892 - 3700815 | 32593.3 |
| tetr/acrr family transcriptional regulator | YT1_RS18050 | Not Available | Positive | 3701165 - 3701842 | 24649.1 |
| duf3107 domain-containing protein | YT1_RS18055 | Not Available | Negative | 3701928 - 3702158 | 8097.69 |
| ferritin-like fold-containing protein | YT1_RS18060 | Not Available | Negative | 3702205 - 3702903 | 25230.9 |
| dead/deah box helicase | YT1_RS18065 | Not Available | Positive | 3703116 - 3704732 | 58013.0 |
| hypothetical protein | YT1_RS18070 | Not Available | Positive | 3704742 - 3705959 | 41782.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


