Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase uvrd2 | YT1_RS17920 | Not Available | Negative | 3669726 - 3671858 | 76990.5 |
| mycoredoxin | YT1_RS17925 | Not Available | Positive | 3671973 - 3672227 | 8953.42 |
| sdr family nad(p)-dependent oxidoreductase | YT1_RS17930 | Not Available | Negative | 3672205 - 3673134 | 32708.7 |
| tetr/acrr family transcriptional regulator | YT1_RS17935 | Not Available | Positive | 3673240 - 3673851 | 22369.7 |
| nad(+) diphosphatase | YT1_RS17940 | Not Available | Negative | 3673857 - 3674759 | 32469.5 |
| potassium channel family protein | YT1_RS17945 | Not Available | Negative | 3674786 - 3675853 | 38133.1 |
| maue/doxx family redox-associated membrane protein | YT1_RS17950 | Not Available | Positive | 3675957 - 3676349 | 13712.0 |
| atp-dependent helicase | YT1_RS17955 | Not Available | Negative | 3676296 - 3679724 | 122429.0 |
| atp-dependent helicase | YT1_RS17960 | Not Available | Negative | 3679721 - 3683047 | 119285.0 |
| paai family thioesterase | YT1_RS17965 | Not Available | Negative | 3683189 - 3683599 | 14186.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


