Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | YT1_RS17820 | Not Available | Negative | 3648712 - 3649185 | 17981.7 |
| permease-like cell division protein ftsx | YT1_RS17825 | Not Available | Negative | 3649279 - 3650184 | 32626.9 |
| cell division atp-binding protein ftse | YT1_RS17830 | Not Available | Negative | 3650245 - 3650934 | 25480.9 |
| hypothetical protein | YT1_RS17835 | Not Available | Negative | 3650966 - 3651409 | 15271.9 |
| mechanosensitive ion channel family protein | YT1_RS17840 | Not Available | Negative | 3651406 - 3652227 | 29622.0 |
| peptide chain release factor 2 | YT1_RS17845 | Not Available | Negative | 3652321 - 3653445 | 42137.1 |
| histidinol-phosphatase | YT1_RS17850 | Not Available | Positive | 3653524 - 3654318 | 27951.7 |
| acyl-coa dehydrogenase family protein | YT1_RS17855 | Not Available | Positive | 3654409 - 3655803 | 49176.8 |
| acyl-coa dehydrogenase family protein | YT1_RS17860 | Not Available | Positive | 3655847 - 3657055 | 42769.0 |
| ion transport protein | YT1_RS17865 | Not Available | Negative | 3657205 - 3657450 | 8375.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


