Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 3641989 - 3642061 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3642135 - 3642210 | Not Available |
| dsba family protein | YT1_RS17780 | Not Available | Negative | 3642343 - 3643089 | 25486.8 |
| maue/doxx family redox-associated membrane protein | YT1_RS17785 | Not Available | Negative | 3643127 - 3643615 | 16793.0 |
| mfs transporter | YT1_RS17790 | Not Available | Negative | 3643642 - 3644850 | 41138.2 |
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | YT1_RS17795 | Not Available | Negative | 3644913 - 3646547 | 57288.0 |
| fluoride efflux transporter crcb | YT1_RS17800 | Not Available | Negative | 3646626 - 3646970 | 11345.1 |
| fluoride efflux transporter fluc | YT1_RS17805 | Not Available | Negative | 3646967 - 3647323 | 12199.0 |
| Tmrna,resume consensus sequence (at 88): aataagcgccgagtctac | Not Available | Not Available | Positive | 3647392 - 3647759 | Not Available |
| dmt family transporter | YT1_RS17815 | Not Available | Negative | 3647861 - 3648703 | 28287.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


