Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobw family gtp-binding protein | YT1_RS17715 | Not Available | Negative | 3633289 - 3634311 | 36917.3 |
| mbl fold metallo-hydrolase | YT1_RS17720 | Not Available | Negative | 3634373 - 3635032 | 23241.1 |
| s-(hydroxymethyl)mycothiol dehydrogenase | YT1_RS17730 | Not Available | Negative | 3635149 - 3636234 | 37825.4 |
| whib family transcriptional regulator | YT1_RS17735 | Not Available | Positive | 3636500 - 3636814 | 11916.1 |
| gluconokinase | YT1_RS17740 | Not Available | Positive | 3636848 - 3637396 | 19573.2 |
| luxr c-terminal-related transcriptional regulator | YT1_RS17745 | Not Available | Negative | 3637380 - 3638657 | 45130.4 |
| iclr family transcriptional regulator | YT1_RS17750 | Not Available | Positive | 3638900 - 3639685 | 27795.7 |
| amp-binding protein | YT1_RS27705 | Not Available | Positive | 3639678 - 3640166 | 17031.5 |
| helix-turn-helix transcriptional regulator | YT1_RS17755 | Not Available | Positive | 3640179 - 3641180 | 35787.1 |
| hypothetical protein | YT1_RS17760 | Not Available | Negative | 3641181 - 3641597 | 14782.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


