Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| meta domain-containing protein | YT1_RS17665 | Not Available | Positive | 3624454 - 3625245 | 26460.3 |
| nucleosidase | YT1_RS17670 | Not Available | Negative | 3625255 - 3625803 | 19234.8 |
| fructosamine kinase family protein | YT1_RS17675 | Not Available | Negative | 3625800 - 3626573 | 27252.3 |
| ammonia-dependent nad(+) synthetase | YT1_RS17680 | Not Available | Positive | 3626649 - 3627488 | 30336.8 |
| moad/this family protein | YT1_RS17685 | Not Available | Negative | 3627519 - 3627779 | 8693.38 |
| gtp 3',8-cyclase moaa | YT1_RS17690 | Not Available | Negative | 3627772 - 3628833 | 38102.8 |
| gephyrin-like molybdotransferase glp | YT1_RS17695 | Not Available | Positive | 3628953 - 3630143 | 39905.1 |
| bifunctional molybdenum cofactor biosynthesis protein moac/moab | YT1_RS17700 | Not Available | Positive | 3630140 - 3631186 | 35533.3 |
| molybdenum cofactor biosynthesis protein moae | YT1_RS17705 | Not Available | Positive | 3631179 - 3631625 | 15709.5 |
| dead/deah box helicase | YT1_RS17710 | Not Available | Positive | 3631801 - 3633255 | 51183.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


