Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit alpha/fixb family protein | YT1_RS17515 | Not Available | Negative | 3591623 - 3592579 | 32196.0 |
| electron transfer flavoprotein subunit beta/fixa family protein | YT1_RS17520 | Not Available | Negative | 3592626 - 3593411 | 27482.8 |
| class i sam-dependent methyltransferase | YT1_RS17525 | Not Available | Positive | 3593642 - 3594421 | 28141.2 |
| glycoside hydrolase family 57 protein | YT1_RS17530 | Not Available | Positive | 3594418 - 3595968 | 57156.6 |
| glycosyltransferase family 4 protein | YT1_RS17535 | Not Available | Positive | 3595965 - 3597209 | 44949.7 |
| amidase | YT1_RS17540 | Not Available | Negative | 3597222 - 3598712 | 52105.0 |
| acyltransferase | YT1_RS17545 | Not Available | Negative | 3598727 - 3599488 | 28250.0 |
| pqq-binding-like beta-propeller repeat protein | YT1_RS17550 | Not Available | Positive | 3599586 - 3600887 | 44093.8 |
| voc family protein | YT1_RS17555 | Not Available | Negative | 3600916 - 3601296 | 13687.3 |
| arsr/smtb family transcription factor | YT1_RS17560 | Not Available | Negative | 3601293 - 3601589 | 10982.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


