Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | YT1_RS17465 | Not Available | Negative | 3580909 - 3582384 | 51487.0 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | YT1_RS17470 | Not Available | Negative | 3582381 - 3582680 | 10421.2 |
| amino acid-binding protein | YT1_RS17475 | Not Available | Positive | 3582971 - 3583621 | 22935.7 |
| gnat family n-acetyltransferase | YT1_RS17480 | Not Available | Negative | 3583631 - 3584119 | 17654.9 |
| nad-dependent dna ligase liga | YT1_RS17485 | Not Available | Negative | 3584199 - 3586322 | 76798.1 |
| methionine synthase | YT1_RS17490 | Not Available | Negative | 3586333 - 3587385 | 35636.6 |
| trna 2-thiouridine(34) synthase mnma | YT1_RS17495 | Not Available | Negative | 3587382 - 3588473 | 37519.5 |
| cysteine desulfurase family protein | YT1_RS17500 | Not Available | Negative | 3588479 - 3589705 | 41836.6 |
| lysophospholipid acyltransferase family protein | YT1_RS17505 | Not Available | Negative | 3589748 - 3590626 | 31303.1 |
| gnat family n-acetyltransferase | YT1_RS17510 | Not Available | Negative | 3590646 - 3591485 | 30238.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


