Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | YT1_RS17415 | Not Available | Negative | 3570543 - 3571334 | 27377.8 |
| pqq-dependent sugar dehydrogenase | YT1_RS17420 | Not Available | Positive | 3571447 - 3572559 | 36890.3 |
| linear amide c-n hydrolase | YT1_RS17425 | Not Available | Negative | 3572584 - 3573534 | 34994.2 |
| voc family protein | YT1_RS17430 | Not Available | Positive | 3573812 - 3574228 | 15314.9 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | YT1_RS17435 | Not Available | Negative | 3574301 - 3575812 | 54586.0 |
| 6-phosphofructokinase | YT1_RS17440 | Not Available | Negative | 3575872 - 3576903 | 37034.4 |
| response regulator | YT1_RS17445 | Not Available | Negative | 3576989 - 3577663 | 24367.7 |
| sensor histidine kinase | YT1_RS17450 | Not Available | Negative | 3577673 - 3578848 | 41802.5 |
| hypothetical protein | YT1_RS17455 | Not Available | Positive | 3578992 - 3579570 | 20207.8 |
| alpha/beta-hydrolase family protein | YT1_RS17460 | Not Available | Positive | 3579567 - 3580880 | 44474.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


