Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | YT1_RS17365 | Not Available | Negative | 3557436 - 3558212 | 27347.7 |
| mfs transporter | YT1_RS17370 | Not Available | Positive | 3558320 - 3559492 | 39168.4 |
| 3-isopropylmalate dehydrogenase | YT1_RS17375 | Not Available | Negative | 3559538 - 3560548 | 35258.0 |
| phosphoglycerate dehydrogenase | YT1_RS17380 | Not Available | Negative | 3560627 - 3562219 | 55288.9 |
| sulp family inorganic anion transporter | YT1_RS17385 | Not Available | Negative | 3562432 - 3564210 | 61284.6 |
| ketol-acid reductoisomerase | YT1_RS17390 | Not Available | Negative | 3564287 - 3565288 | 35823.8 |
| acetolactate synthase small subunit | YT1_RS17395 | Not Available | Negative | 3565339 - 3565842 | 18239.3 |
| acetolactate synthase large subunit | YT1_RS17400 | Not Available | Negative | 3565839 - 3567785 | 69205.6 |
| ph domain-containing protein | YT1_RS17405 | Not Available | Positive | 3568052 - 3568525 | 16867.2 |
| dihydroxy-acid dehydratase | YT1_RS17410 | Not Available | Positive | 3568647 - 3570488 | 64284.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


