Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tvp38/tmem64 family protein | YT1_RS02500 | Not Available | Positive | 311268 - 311906 | 21905.2 |
| cytochrome b | YT1_RS02510 | Not Available | Positive | 313066 - 314712 | 60873.3 |
| four-helix bundle copper-binding protein | YT1_RS02515 | Not Available | Positive | 315735 - 316142 | 14443.2 |
| prolipoprotein diacylglyceryl transferase | YT1_RS02525 | Not Available | Positive | 317733 - 318638 | 32661.1 |
| type ii glyceraldehyde-3-phosphate dehydrogenase | YT1_RS02530 | Not Available | Negative | 319277 - 320356 | 38517.8 |
| abc1 kinase family protein | YT1_RS02535 | Not Available | Negative | 320448 - 321839 | 50263.4 |
| beta-phosphoglucomutase family hydrolase | YT1_RS02540 | Not Available | Negative | 322101 - 325355 | 118513.0 |
| dmt family transporter | YT1_RS02545 | Not Available | Positive | 326070 - 326930 | 29986.5 |
| phosphogluconate dehydrogenase (nad(+)-dependent, decarboxylating) | YT1_RS02550 | Not Available | Negative | 327331 - 328338 | 35506.9 |
| universal stress protein | YT1_RS02555 | Not Available | Negative | 328428 - 328880 | 15904.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


