Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide adenylyltransferase | YT1_RS17270 | Not Available | Negative | 3538777 - 3539499 | 26946.8 |
| vwa domain-containing protein | YT1_RS17275 | Not Available | Negative | 3539519 - 3540970 | 53053.3 |
| aaa family atpase | YT1_RS17280 | Not Available | Negative | 3540972 - 3541853 | 32319.9 |
| glutamate-5-semialdehyde dehydrogenase | YT1_RS17285 | Not Available | Negative | 3541920 - 3543224 | 44964.3 |
| d-alanine--d-alanine ligase family protein | YT1_RS17290 | Not Available | Negative | 3543255 - 3544361 | 39368.9 |
| cystathionine gamma-lyase | YT1_RS17295 | Not Available | Negative | 3544411 - 3545532 | 38650.1 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | YT1_RS17300 | Not Available | Negative | 3545537 - 3546535 | 34347.2 |
| 2-phospho-l-lactate guanylyltransferase | YT1_RS17305 | Not Available | Positive | 3546652 - 3547377 | 24035.8 |
| rna degradosome polyphosphate kinase | YT1_RS17310 | Not Available | Positive | 3547428 - 3549644 | 81389.9 |
| nudix hydrolase | YT1_RS17315 | Not Available | Positive | 3549653 - 3550591 | 34028.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


