Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoadenylyl-sulfate reductase | YT1_RS17170 | Not Available | Positive | 3519428 - 3520165 | 26448.2 |
| sulfate adenylyltransferase subunit cysd | YT1_RS17175 | Not Available | Positive | 3520162 - 3521106 | 35728.9 |
| sulfate adenylyltransferase subunit 1 | YT1_RS17180 | Not Available | Positive | 3521109 - 3522431 | 47120.0 |
| sirohydrochlorin chelatase | YT1_RS17185 | Not Available | Positive | 3522428 - 3523183 | 26242.7 |
| universal stress protein | YT1_RS17190 | Not Available | Positive | 3523256 - 3524137 | 31430.1 |
| extracellular solute-binding protein | YT1_RS17195 | Not Available | Negative | 3524206 - 3525222 | 34784.2 |
| hypothetical protein | YT1_RS17200 | Not Available | Negative | 3525321 - 3525527 | 7271.84 |
| glycoside hydrolase family 15 protein | YT1_RS17205 | Not Available | Positive | 3525592 - 3527550 | 73240.4 |
| nad(p)h-dependent flavin oxidoreductase | YT1_RS17210 | Not Available | Negative | 3527555 - 3528487 | 32196.1 |
| translation elongation factor 4 | YT1_RS17215 | Not Available | Negative | 3528494 - 3530281 | 65698.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


