Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS17070 | Not Available | Negative | 3499405 - 3499878 | 16048.9 |
| isoprenyl transferase | YT1_RS17075 | Not Available | Negative | 3499875 - 3500681 | 30817.8 |
| dna repair protein reco | YT1_RS17080 | Not Available | Negative | 3500638 - 3501453 | 29554.6 |
| alpha/beta fold hydrolase | YT1_RS17085 | Not Available | Negative | 3501518 - 3502555 | 37761.7 |
| amidase | YT1_RS17090 | Not Available | Positive | 3502748 - 3504166 | 49617.1 |
| tetr/acrr family transcriptional regulator | YT1_RS17095 | Not Available | Positive | 3504172 - 3504789 | 21625.5 |
| hypothetical protein | YT1_RS17100 | Not Available | Negative | 3504756 - 3505061 | 10361.9 |
| gtpase era | YT1_RS17105 | Not Available | Negative | 3505124 - 3506041 | 33482.5 |
| hemolysin family protein | YT1_RS17110 | Not Available | Negative | 3506109 - 3507419 | 46952.0 |
| rrna maturation rnase ybey | YT1_RS17115 | Not Available | Negative | 3507444 - 3507986 | 19948.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


