Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulp family inorganic anion transporter | YT1_RS16920 | Not Available | Negative | 3469492 - 3471201 | 58209.5 |
| Trna-val | Not Available | Not Available | Positive | 3471365 - 3471439 | Not Available |
| peroxiredoxin | YT1_RS16930 | Not Available | Negative | 3471474 - 3471938 | 16816.7 |
| duf3052 domain-containing protein | YT1_RS16935 | Not Available | Negative | 3471986 - 3472408 | 15142.4 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | YT1_RS16940 | Not Available | Positive | 3472765 - 3475617 | 104584.0 |
| pucr family transcriptional regulator | YT1_RS16945 | Not Available | Positive | 3475730 - 3476980 | 44976.7 |
| acp s-malonyltransferase | YT1_RS16950 | Not Available | Positive | 3477109 - 3478026 | 31058.3 |
| meromycolate extension acyl carrier protein acpm | YT1_RS16955 | Not Available | Positive | 3478144 - 3478422 | 9928.51 |
| kasa/kasb family beta-ketoacyl-acp synthase | YT1_RS16960 | Not Available | Positive | 3478431 - 3479678 | 42532.6 |
| acyl-coa carboxylase subunit beta | YT1_RS16965 | Not Available | Positive | 3479778 - 3481211 | 50391.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


