Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | YT1_RS02445 | Not Available | Positive | 299541 - 299963 | 15790.0 |
| organomercurial lyase merb | YT1_RS02450 | Not Available | Positive | 300034 - 300675 | 22612.6 |
| hypothetical protein | YT1_RS02455 | Not Available | Positive | 300740 - 301255 | 18050.8 |
| tn3 family transposase | YT1_RS02460 | Not Available | Negative | 301283 - 304423 | 116683.0 |
| heavy metal translocating p-type atpase | YT1_RS02465 | Not Available | Positive | 304570 - 305508 | 31750.7 |
| c-type cytochrome biogenesis protein ccsb | YT1_RS02475 | Not Available | Negative | 306378 - 307337 | 34615.9 |
| cytochrome c biogenesis protein resb | YT1_RS02480 | Not Available | Negative | 307342 - 308973 | 59188.8 |
| cytochrome c biogenesis ccda family protein | YT1_RS02485 | Not Available | Negative | 308970 - 309776 | 27520.3 |
| tlpa disulfide reductase family protein | YT1_RS02490 | Not Available | Negative | 309773 - 310390 | 22007.3 |
| tlpa disulfide reductase family protein | YT1_RS02495 | Not Available | Negative | 310387 - 311130 | 25999.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


