Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate phosphoribosyltransferase | YT1_RS16620 | Not Available | Negative | 3406048 - 3407121 | 36122.1 |
| hypothetical protein | YT1_RS16625 | Not Available | Negative | 3407187 - 3407633 | 15753.5 |
| heme-copper oxidase subunit iii | YT1_RS16630 | Not Available | Positive | 3407771 - 3408382 | 22348.5 |
| c-type cytochrome | YT1_RS16635 | Not Available | Positive | 3408482 - 3409315 | 29060.6 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | YT1_RS16640 | Not Available | Positive | 3409312 - 3410439 | 41543.6 |
| cytochrome b | YT1_RS16645 | Not Available | Positive | 3410436 - 3412085 | 61087.7 |
| cytochrome c oxidase assembly protein | YT1_RS16650 | Not Available | Negative | 3412224 - 3413099 | 30207.1 |
| hypothetical protein | YT1_RS16660 | Not Available | Positive | 3413267 - 3413578 | 10831.1 |
| cytochrome c oxidase subunit 4 | YT1_RS16665 | Not Available | Negative | 3413681 - 3414097 | 14860.2 |
| cytochrome c oxidase subunit ii | YT1_RS16670 | Not Available | Negative | 3414129 - 3415193 | 39433.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


