Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsa family atpase | YT1_RS16575 | Not Available | Negative | 3396541 - 3397761 | 42675.2 |
| srpbcc family protein | YT1_RS16580 | Not Available | Negative | 3397794 - 3398231 | 16010.1 |
| hypothetical protein | YT1_RS16585 | Not Available | Negative | 3398356 - 3398754 | 14750.7 |
| glycosyltransferase family 4 protein | YT1_RS16590 | Not Available | Negative | 3398830 - 3399957 | 39974.3 |
| hypothetical protein | YT1_RS16595 | Not Available | Negative | 3400000 - 3401328 | 46726.9 |
| nlpc/p60 family protein | YT1_RS16600 | Not Available | Negative | 3401385 - 3402428 | 36597.1 |
| c40 family peptidase | YT1_RS16605 | Not Available | Negative | 3402626 - 3403207 | 19313.0 |
| hypothetical protein | YT1_RS27340 | Not Available | Negative | 3403537 - 3403698 | 5208.23 |
| dedd exonuclease domain-containing protein | YT1_RS16610 | Not Available | Positive | 3403930 - 3405675 | 62891.7 |
| lrp/asnc family transcriptional regulator | YT1_RS16615 | Not Available | Positive | 3405718 - 3405993 | 9696.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


