Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m23 family metallopeptidase | YT1_RS02395 | Not Available | Negative | 289669 - 290376 | 23139.4 |
| had-ic family p-type atpase | YT1_RS02400 | Not Available | Positive | 290968 - 291891 | 32257.4 |
| atp-binding protein | YT1_RS02405 | Not Available | Negative | 292299 - 292772 | 16347.6 |
| recombinase family protein | YT1_RS02410 | Not Available | Negative | 292981 - 294075 | 39141.0 |
| dihydrolipoyl dehydrogenase family protein | YT1_RS02415 | Not Available | Negative | 294258 - 295619 | 48840.0 |
| cytochrome c biogenesis ccda family protein | YT1_RS02420 | Not Available | Negative | 295698 - 296690 | 33170.5 |
| tlpa family protein disulfide reductase | YT1_RS02425 | Not Available | Negative | 296687 - 297232 | 18539.2 |
| hypothetical protein | YT1_RS02430 | Not Available | Negative | 297229 - 297555 | 10739.1 |
| arsr/smtb family transcription factor | YT1_RS02435 | Not Available | Negative | 297578 - 297961 | 13800.5 |
| mercury(ii) reductase | YT1_RS02440 | Not Available | Positive | 298083 - 299519 | 49865.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


