Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-ribosomal peptide synthetase | YT1_RS16230 | Not Available | Negative | 3310241 - 3325060 | 516641.0 |
| tigr00725 family protein | YT1_RS16235 | Not Available | Negative | 3325195 - 3325686 | 16420.8 |
| alpha/beta fold hydrolase | YT1_RS16240 | Not Available | Positive | 3325793 - 3326695 | 31615.3 |
| fha domain-containing protein | YT1_RS16245 | Not Available | Negative | 3326704 - 3327324 | 22771.1 |
| chorismate mutase | YT1_RS16250 | Not Available | Negative | 3327345 - 3327647 | 10879.9 |
| magnesium transporter | YT1_RS16255 | Not Available | Negative | 3327739 - 3328728 | 34478.2 |
| ychj family protein | YT1_RS16260 | Not Available | Positive | 3328814 - 3329224 | 15420.1 |
| duf6480 family protein | YT1_RS16265 | Not Available | Negative | 3329310 - 3329540 | 7738.23 |
| hypothetical protein | YT1_RS16270 | Not Available | Negative | 3329642 - 3329893 | 8868.42 |
| alpha/beta fold hydrolase | YT1_RS16275 | Not Available | Negative | 3330319 - 3331122 | 28203.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


