Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin synthase biob | YT1_RS16135 | Not Available | Negative | 3290724 - 3291737 | 36381.0 |
| tetr/acrr family transcriptional regulator c-terminal domain-containing protein | YT1_RS16140 | Not Available | Positive | 3291865 - 3292527 | 23466.0 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | YT1_RS16145 | Not Available | Negative | 3292554 - 3293300 | 28340.1 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | YT1_RS16150 | Not Available | Negative | 3293303 - 3295219 | 69951.9 |
| hypothetical protein | YT1_RS16155 | Not Available | Negative | 3295277 - 3296092 | 30622.4 |
| hypothetical protein | YT1_RS16160 | Not Available | Negative | 3296089 - 3296373 | 10439.2 |
| hypothetical protein | YT1_RS27330 | Not Available | Positive | 3296643 - 3296795 | 5307.18 |
| hypothetical protein | YT1_RS16165 | Not Available | Positive | 3296831 - 3297259 | 14324.0 |
| atp-binding protein | YT1_RS16170 | Not Available | Negative | 3297348 - 3297803 | 16023.7 |
| stas domain-containing protein | YT1_RS16175 | Not Available | Negative | 3297907 - 3298296 | 13160.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


