Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | YT1_RS15995 | Not Available | Positive | 3265550 - 3266044 | 17546.9 |
| aminopeptidase n | YT1_RS16000 | Not Available | Negative | 3266078 - 3268567 | 90966.7 |
| tautomerase family protein | YT1_RS16005 | Not Available | Negative | 3268632 - 3268829 | 7015.48 |
| hypothetical protein | YT1_RS27320 | Not Available | Positive | 3268922 - 3269071 | 5098.24 |
| phosphoribosyl-amp cyclohydrolase | YT1_RS16010 | Not Available | Negative | 3269144 - 3269491 | 12634.9 |
| imidazole glycerol phosphate synthase subunit hisf | YT1_RS16015 | Not Available | Negative | 3269488 - 3270261 | 26884.9 |
| inositol monophosphatase family protein | YT1_RS16020 | Not Available | Negative | 3270258 - 3271085 | 28550.8 |
| bifunctional 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase/phosphoribosylanthranilate isomerase pria | YT1_RS16025 | Not Available | Negative | 3271090 - 3271824 | 25533.0 |
| hypothetical protein | YT1_RS16030 | Not Available | Negative | 3271875 - 3272147 | 9301.27 |
| imidazole glycerol phosphate synthase subunit hish | YT1_RS16035 | Not Available | Negative | 3272213 - 3272848 | 22151.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


