Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | YT1_RS15900 | Not Available | Negative | 3241764 - 3242636 | 32183.3 |
| pyruvate kinase | YT1_RS15905 | Not Available | Negative | 3242633 - 3244054 | 51264.6 |
| merr family transcriptional regulator | YT1_RS15910 | Not Available | Positive | 3244344 - 3244757 | 15217.7 |
| dna starvation/stationary phase protection protein dps | YT1_RS15915 | Not Available | Negative | 3244826 - 3245365 | 19560.8 |
| trehalose-6-phosphate synthase | YT1_RS15920 | Not Available | Positive | 3245772 - 3247214 | 52655.6 |
| cytochrome p450 | YT1_RS15925 | Not Available | Positive | 3247307 - 3248680 | 49610.2 |
| hypothetical protein | YT1_RS27315 | Not Available | Negative | 3248830 - 3248994 | 5700.52 |
| srpbcc family protein | YT1_RS15930 | Not Available | Negative | 3248991 - 3249452 | 17354.2 |
| glutamate synthase subunit beta | YT1_RS15935 | Not Available | Negative | 3249499 - 3250992 | 53301.4 |
| glutamate synthase large subunit | YT1_RS15940 | Not Available | Negative | 3250985 - 3255466 | 158740.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


