Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf and antar domain-containing protein | YT1_RS15850 | Not Available | Negative | 3232216 - 3232917 | 25439.3 |
| acyl carrier protein | YT1_RS15855 | Not Available | Negative | 3233049 - 3233321 | 9662.33 |
| dihydrolipoamide acetyltransferase family protein | YT1_RS15860 | Not Available | Negative | 3233331 - 3234563 | 43127.6 |
| alpha-ketoacid dehydrogenase subunit beta | YT1_RS15865 | Not Available | Negative | 3234573 - 3235547 | 34452.4 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | YT1_RS15870 | Not Available | Negative | 3235544 - 3236557 | 36397.5 |
| acetate--coa ligase | YT1_RS15875 | Not Available | Negative | 3236554 - 3238383 | 66243.8 |
| adenosine-specific kinase | YT1_RS15880 | Not Available | Positive | 3238650 - 3239132 | 17139.6 |
| uridine kinase | YT1_RS15885 | Not Available | Negative | 3239303 - 3239953 | 23384.8 |
| nad(p)-dependent alcohol dehydrogenase | YT1_RS15890 | Not Available | Negative | 3240019 - 3240972 | 32423.8 |
| tetr/acrr family transcriptional regulator | YT1_RS15895 | Not Available | Positive | 3241053 - 3241703 | 23622.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


