Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS02345 | Not Available | Positive | 281966 - 282499 | 18939.9 |
| hypothetical protein | YT1_RS02350 | Not Available | Positive | 282591 - 283211 | 21973.5 |
| vitamin k epoxide reductase family protein | YT1_RS02355 | Not Available | Negative | 283281 - 283928 | 23491.8 |
| dsba family protein | YT1_RS02360 | Not Available | Negative | 283925 - 284584 | 24282.1 |
| copper resistance copc family protein | YT1_RS02365 | Not Available | Positive | 284770 - 285330 | 18434.9 |
| cytochrome c oxidase assembly protein | YT1_RS02370 | Not Available | Positive | 285376 - 286299 | 33789.9 |
| nramp family divalent metal transporter | YT1_RS02375 | Not Available | Positive | 286390 - 287628 | 43249.1 |
| duf4229 domain-containing protein | YT1_RS02380 | Not Available | Negative | 287650 - 287889 | 8535.92 |
| duf305 domain-containing protein | YT1_RS02385 | Not Available | Negative | 287998 - 288732 | 25560.7 |
| duf3105 domain-containing protein | YT1_RS02390 | Not Available | Negative | 288729 - 289421 | 24049.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


