Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antar domain-containing response regulator | YT1_RS15795 | Not Available | Negative | 3217532 - 3218146 | 22628.4 |
| Trna-leu | Not Available | Not Available | Positive | 3218257 - 3218330 | Not Available |
| hypothetical protein | YT1_RS15805 | Not Available | Positive | 3218538 - 3219320 | 26786.5 |
| cytochrome p450 | YT1_RS15815 | Not Available | Negative | 3219694 - 3220899 | 44015.1 |
| pdr/vanb family oxidoreductase | YT1_RS15820 | Not Available | Negative | 3220923 - 3221738 | 29272.1 |
| iclr family transcriptional regulator | YT1_RS15825 | Not Available | Negative | 3221982 - 3222743 | 27288.9 |
| mfs transporter | YT1_RS15830 | Not Available | Negative | 3222772 - 3224121 | 46268.4 |
| cation-translocating p-type atpase | YT1_RS15835 | Not Available | Negative | 3224678 - 3229249 | 155035.0 |
| helix-turn-helix transcriptional regulator | YT1_RS15840 | Not Available | Negative | 3229421 - 3231207 | 62089.7 |
| duf4383 domain-containing protein | YT1_RS15845 | Not Available | Negative | 3231602 - 3232042 | 15614.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


