Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit nuoh | YT1_RS15595 | Not Available | Negative | 3172100 - 3173452 | 48598.1 |
| nadh-quinone oxidoreductase subunit g | YT1_RS15600 | Not Available | Negative | 3173496 - 3175967 | 86961.8 |
| nadh-quinone oxidoreductase subunit nuof | YT1_RS15605 | Not Available | Negative | 3175964 - 3177289 | 47637.5 |
| nadh-quinone oxidoreductase subunit nuoe | YT1_RS15610 | Not Available | Negative | 3177291 - 3178163 | 30509.9 |
| nadh dehydrogenase (quinone) subunit d | YT1_RS15615 | Not Available | Negative | 3178160 - 3179473 | 48227.3 |
| nadh-quinone oxidoreductase subunit c | YT1_RS15620 | Not Available | Negative | 3179470 - 3180228 | 28033.6 |
| nuob/complex i 20 kda subunit family protein | YT1_RS15625 | Not Available | Negative | 3180225 - 3180785 | 20173.0 |
| nadh-quinone oxidoreductase subunit a | YT1_RS15630 | Not Available | Negative | 3180869 - 3181228 | 13111.2 |
| response regulator transcription factor | YT1_RS15635 | Not Available | Negative | 3181495 - 3181917 | 15004.9 |
| sulp family inorganic anion transporter | YT1_RS15640 | Not Available | Negative | 3182095 - 3183897 | 61672.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


