Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf427 domain-containing protein | YT1_RS15545 | Not Available | Positive | 3161389 - 3161889 | 17895.9 |
| hypothetical protein | YT1_RS15550 | Not Available | Positive | 3162242 - 3162886 | 20870.9 |
| alpha/beta fold hydrolase | YT1_RS15555 | Not Available | Negative | 3162963 - 3163802 | 31001.7 |
| helix-turn-helix domain-containing protein | YT1_RS15560 | Not Available | Positive | 3164004 - 3164204 | 7296.66 |
| nadh-quinone oxidoreductase subunit nuon | YT1_RS15565 | Not Available | Negative | 3164838 - 3166487 | 56318.7 |
| nadh-quinone oxidoreductase subunit m | YT1_RS15570 | Not Available | Negative | 3166484 - 3168115 | 57492.8 |
| nadh-quinone oxidoreductase subunit l | YT1_RS15575 | Not Available | Negative | 3168115 - 3170268 | 72990.2 |
| nadh-quinone oxidoreductase subunit nuok | YT1_RS15580 | Not Available | Negative | 3170369 - 3170668 | 10873.7 |
| nadh-quinone oxidoreductase subunit j | YT1_RS15585 | Not Available | Negative | 3170665 - 3171468 | 27949.0 |
| nadh-quinone oxidoreductase subunit nuoi | YT1_RS15590 | Not Available | Negative | 3171502 - 3172107 | 22059.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


