Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf262 and duf1524 domain-containing protein | YT1_RS15500 | Not Available | Positive | 3141621 - 3143720 | 80238.3 |
| hypothetical protein | YT1_RS15505 | Not Available | Negative | 3144235 - 3145158 | 33031.8 |
| helix-turn-helix transcriptional regulator | YT1_RS15510 | Not Available | Negative | 3145624 - 3145883 | 9789.65 |
| hypothetical protein | YT1_RS27310 | Not Available | Negative | 3146120 - 3146296 | 6056.39 |
| hypothetical protein | YT1_RS15515 | Not Available | Positive | 3146564 - 3147226 | 23017.9 |
| duf4352 domain-containing protein | YT1_RS15520 | Not Available | Negative | 3147275 - 3147751 | 15946.5 |
| hypothetical protein | YT1_RS15525 | Not Available | Negative | 3148066 - 3148317 | 9223.18 |
| helix-turn-helix transcriptional regulator | YT1_RS15530 | Not Available | Positive | 3148401 - 3148514 | 4283.97 |
| type i polyketide synthase | YT1_RS15535 | Not Available | Negative | 3148653 - 3159200 | 368099.0 |
| aldehyde dehydrogenase family protein | YT1_RS15540 | Not Available | Positive | 3159757 - 3161139 | 49925.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


