Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-gamma-glutamyl-phosphate reductase | YT1_RS15370 | Not Available | Negative | 3109968 - 3111041 | 36350.3 |
| hypothetical protein | YT1_RS15375 | Not Available | Negative | 3111103 - 3111432 | 11393.0 |
| phenylalanine--trna ligase subunit beta | YT1_RS15380 | Not Available | Negative | 3111517 - 3114003 | 87702.1 |
| phenylalanine--trna ligase subunit alpha | YT1_RS15385 | Not Available | Negative | 3114058 - 3115128 | 38469.7 |
| trmh family rna methyltransferase | YT1_RS15390 | Not Available | Negative | 3115237 - 3116049 | 28044.5 |
| 50s ribosomal protein l20 | YT1_RS15395 | Not Available | Negative | 3116099 - 3116485 | 14242.2 |
| 50s ribosomal protein l35 | YT1_RS15400 | Not Available | Negative | 3116550 - 3116744 | 7135.88 |
| translation initiation factor if-3 | YT1_RS15405 | Not Available | Negative | 3116834 - 3117493 | 24050.1 |
| duf1844 domain-containing protein | YT1_RS15410 | Not Available | Positive | 3117851 - 3118204 | 12380.6 |
| pyruvate kinase | YT1_RS15415 | Not Available | Negative | 3118217 - 3120028 | 64902.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


