Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS02295 | Not Available | Positive | 269422 - 269604 | 6832.88 |
| multicopper oxidase family protein | YT1_RS02305 | Not Available | Negative | 270679 - 272175 | 53388.1 |
| shoct domain-containing protein | YT1_RS27460 | Not Available | Negative | 272172 - 272396 | 8062.71 |
| ig-like domain-containing protein | YT1_RS02310 | Not Available | Positive | 272658 - 273887 | 43263.2 |
| cation diffusion facilitator family transporter | YT1_RS02315 | Not Available | Negative | 274555 - 275478 | 32499.8 |
| cytochrome c oxidase assembly protein | YT1_RS02320 | Not Available | Positive | 275690 - 277681 | 68400.2 |
| m23 family metallopeptidase | YT1_RS02325 | Not Available | Positive | 277819 - 278715 | 30994.8 |
| blai/meci/copy family transcriptional regulator | YT1_RS02330 | Not Available | Positive | 278753 - 279115 | 13827.2 |
| m56 family metallopeptidase | YT1_RS02335 | Not Available | Positive | 279112 - 280059 | 32372.0 |
| cytochrome c oxidase subunit i | YT1_RS02340 | Not Available | Positive | 280171 - 281937 | 65123.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


