Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aurf n-oxygenase family protein | YT1_RS14970 | Not Available | Negative | 2997594 - 2998574 | 35578.6 |
| prephenate dehydrogenase dimerization domain-containing protein | YT1_RS14975 | Not Available | Negative | 2998561 - 2999469 | 30569.7 |
| aminodeoxychorismate synthase component i | YT1_RS14980 | Not Available | Negative | 2999466 - 3001565 | 75744.8 |
| chorismate mutase | YT1_RS14985 | Not Available | Negative | 3001574 - 3001939 | 13604.2 |
| rna polymerase-binding protein rbpa | YT1_RS14990 | Not Available | Negative | 3002198 - 3002536 | 12832.2 |
| hypothetical protein | YT1_RS14995 | Not Available | Positive | 3002744 - 3003076 | 12073.4 |
| hypothetical protein | YT1_RS15000 | Not Available | Negative | 3003087 - 3003695 | 21072.3 |
| non-ribosomal peptide synthetase | YT1_RS15005 | Not Available | Positive | 3004139 - 3026143 | 782476.0 |
| voc family protein | YT1_RS15010 | Not Available | Negative | 3026292 - 3026645 | 12483.8 |
| redox-sensitive transcriptional activator soxr | YT1_RS15020 | Not Available | Positive | 3027921 - 3028376 | 16496.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


