Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr/smtb family transcription factor | YT1_RS02250 | Not Available | Negative | 260629 - 260988 | 12948.6 |
| recombinase family protein | YT1_RS02255 | Not Available | Positive | 261186 - 261788 | 22003.3 |
| mu transposase c-terminal domain-containing protein | YT1_RS02260 | Not Available | Positive | 261790 - 263175 | 51993.2 |
| aaa family atpase | YT1_RS02265 | Not Available | Positive | 263175 - 263984 | 31132.4 |
| recombinase family protein | YT1_RS02270 | Not Available | Positive | 264110 - 264673 | 20695.9 |
| etec_3214 domain-containing protein | YT1_RS27085 | Not Available | Positive | 264670 - 265386 | 26698.5 |
| is21-like element helper atpase istb | YT1_RS02275 | Not Available | Negative | 265394 - 266239 | 30372.5 |
| mu transposase domain-containing protein | YT1_RS02280 | Not Available | Negative | 266236 - 267612 | 50580.0 |
| abi family protein | YT1_RS02285 | Not Available | Negative | 267969 - 268721 | 28538.0 |
| hypothetical protein | YT1_RS02290 | Not Available | Negative | 268995 - 269285 | 10652.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


