Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| feccd family abc transporter permease | YT1_RS14570 | Not Available | Negative | 2891690 - 2892769 | 36019.0 |
| hemin abc transporter substrate-binding protein | YT1_RS14575 | Not Available | Negative | 2892766 - 2893776 | 33299.1 |
| heme oxygenase (biliverdin-producing) | YT1_RS14580 | Not Available | Negative | 2893773 - 2894447 | 25181.9 |
| aldo/keto reductase | YT1_RS14585 | Not Available | Negative | 2894550 - 2895488 | 32250.0 |
| undecaprenyl-diphosphate phosphatase | YT1_RS14590 | Not Available | Positive | 2895692 - 2896525 | 29565.4 |
| histidine phosphatase family protein | YT1_RS14595 | Not Available | Positive | 2896581 - 2897261 | 23857.6 |
| duf3090 domain-containing protein | YT1_RS14600 | Not Available | Positive | 2897304 - 2897888 | 21026.8 |
| sco1664 family protein | YT1_RS14605 | Not Available | Positive | 2897893 - 2898696 | 28929.9 |
| cysteine--1-d-myo-inosityl 2-amino-2-deoxy-alpha-d-glucopyranoside ligase | YT1_RS14610 | Not Available | Positive | 2898749 - 2899990 | 45124.9 |
| brex system serine/threonine kinase pglw | YT1_RS14615 | Not Available | Positive | 2900105 - 2904334 | 152258.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


