Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tvp38/tmem64 family protein | YT1_RS14470 | Not Available | Negative | 2872641 - 2873321 | 23149.9 |
| methylmalonyl-coa mutase small subunit | YT1_RS14475 | Not Available | Positive | 2873569 - 2875434 | 64134.6 |
| methylmalonyl-coa mutase | YT1_RS14480 | Not Available | Positive | 2875435 - 2877681 | 80823.8 |
| methylmalonyl co-a mutase-associated gtpase meab | YT1_RS14485 | Not Available | Positive | 2877688 - 2878707 | 36371.0 |
| coa transferase | YT1_RS14490 | Not Available | Negative | 2878704 - 2880083 | 48003.2 |
| sulfite exporter taue/safe family protein | YT1_RS14495 | Not Available | Negative | 2880106 - 2881050 | 31811.1 |
| saccharopine dehydrogenase family protein | YT1_RS14500 | Not Available | Negative | 2881339 - 2882583 | 43898.3 |
| duf2784 domain-containing protein | YT1_RS14505 | Not Available | Negative | 2882609 - 2882980 | 13715.8 |
| universal stress protein | YT1_RS14510 | Not Available | Negative | 2883028 - 2883423 | 13632.1 |
| sdr family oxidoreductase | YT1_RS14515 | Not Available | Negative | 2883562 - 2885004 | 51389.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


