Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp reductase fabg1 | YT1_RS14420 | Not Available | Positive | 2864094 - 2864843 | 25982.0 |
| nadh-dependent enoyl-acp reductase inha | YT1_RS14425 | Not Available | Positive | 2864894 - 2865706 | 28115.7 |
| ferrochelatase | YT1_RS14430 | Not Available | Positive | 2865716 - 2866780 | 38253.3 |
| hypothetical protein | YT1_RS14435 | Not Available | Positive | 2866948 - 2867991 | 36386.9 |
| hypothetical protein | YT1_RS14440 | Not Available | Negative | 2867982 - 2868791 | 27131.2 |
| duf3097 domain-containing protein | YT1_RS14445 | Not Available | Positive | 2868898 - 2869719 | 29293.9 |
| nfed family protein | YT1_RS14450 | Not Available | Positive | 2869782 - 2870213 | 14710.1 |
| spfh domain-containing protein | YT1_RS14455 | Not Available | Positive | 2870214 - 2871443 | 44601.1 |
| hypothetical protein | YT1_RS14460 | Not Available | Negative | 2871498 - 2872031 | 17465.8 |
| hypothetical protein | YT1_RS14465 | Not Available | Negative | 2872028 - 2872609 | 20469.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


