Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | YT1_RS14370 | Not Available | Negative | 2851301 - 2852089 | 26709.2 |
| abc-f family atp-binding cassette domain-containing protein | YT1_RS14375 | Not Available | Positive | 2852215 - 2853843 | 58082.2 |
| helix-turn-helix domain-containing protein | YT1_RS14380 | Not Available | Positive | 2853992 - 2854237 | 8835.45 |
| tetr/acrr family transcriptional regulator | YT1_RS14385 | Not Available | Negative | 2854243 - 2854815 | 21019.0 |
| aconitate hydratase acna | YT1_RS14390 | Not Available | Negative | 2854929 - 2857733 | 100923.0 |
| duf6676 family protein | YT1_RS14395 | Not Available | Positive | 2857991 - 2858533 | 19001.4 |
| nlpc/p60 family protein | YT1_RS14400 | Not Available | Positive | 2858871 - 2860781 | 64798.4 |
| aaa family atpase | YT1_RS14405 | Not Available | Positive | 2860930 - 2862087 | 41336.8 |
| duf58 domain-containing protein | YT1_RS14410 | Not Available | Positive | 2862084 - 2863037 | 34700.3 |
| vwa domain-containing protein | YT1_RS14415 | Not Available | Positive | 2863034 - 2864014 | 34510.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


