Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome biogenesis protein ccsb | YT1_RS02200 | Not Available | Negative | 251382 - 252341 | 34555.9 |
| cytochrome c biogenesis protein resb | YT1_RS02205 | Not Available | Negative | 252346 - 253977 | 59323.0 |
| cytochrome c biogenesis ccda family protein | YT1_RS02210 | Not Available | Negative | 253974 - 254780 | 27520.3 |
| tlpa disulfide reductase family protein | YT1_RS02215 | Not Available | Negative | 254777 - 255334 | 19638.3 |
| tlpa family protein disulfide reductase | YT1_RS02220 | Not Available | Negative | 255400 - 255744 | 12145.6 |
| duf3703 domain-containing protein | YT1_RS02225 | Not Available | Negative | 256750 - 256923 | 6378.68 |
| signal peptidase ii | YT1_RS02230 | Not Available | Negative | 256929 - 257438 | 17427.1 |
| heavy metal translocating p-type atpase | YT1_RS02235 | Not Available | Negative | 257435 - 259393 | 66899.5 |
| arsr/smtb family transcription factor | YT1_RS02240 | Not Available | Negative | 259390 - 259779 | 13257.8 |
| cadmium resistance transporter | YT1_RS02245 | Not Available | Negative | 260036 - 260632 | 20529.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


