Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | YT1_RS14125 | Not Available | Positive | 2795325 - 2796608 | 44201.8 |
| methionine adenosyltransferase | YT1_RS14130 | Not Available | Positive | 2796781 - 2797995 | 42803.9 |
| primosomal protein n' | YT1_RS14135 | Not Available | Positive | 2798017 - 2800035 | 70008.1 |
| esterase/lipase family protein | YT1_RS14140 | Not Available | Positive | 2800214 - 2801194 | 33337.0 |
| phosphatase pap2 family protein | YT1_RS27670 | Not Available | Positive | 2801309 - 2802454 | 40767.9 |
| helix-turn-helix transcriptional regulator | YT1_RS27675 | Not Available | Negative | 2802354 - 2802734 | 13874.7 |
| methionyl-trna formyltransferase | YT1_RS14150 | Not Available | Positive | 2802962 - 2803885 | 32514.0 |
| rsmb/nop family class i sam-dependent rna methyltransferase | YT1_RS14155 | Not Available | Positive | 2803882 - 2805327 | 51428.6 |
| 1-phosphofructokinase family hexose kinase | YT1_RS14160 | Not Available | Positive | 2805419 - 2806348 | 32234.7 |
| phosphoenolpyruvate synthase | YT1_RS14165 | Not Available | Negative | 2806414 - 2808693 | 80671.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


