Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | YT1_RS14075 | Not Available | Positive | 2784662 - 2785261 | 21281.6 |
| aspartate carbamoyltransferase catalytic subunit | YT1_RS14080 | Not Available | Positive | 2785258 - 2786202 | 33362.3 |
| dihydroorotase | YT1_RS14085 | Not Available | Positive | 2786268 - 2787587 | 46361.4 |
| hypothetical protein | YT1_RS14090 | Not Available | Positive | 2787587 - 2788093 | 18601.3 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | YT1_RS14095 | Not Available | Positive | 2788190 - 2789353 | 41119.3 |
| carbamoyl-phosphate synthase large subunit | YT1_RS14100 | Not Available | Positive | 2789354 - 2792761 | 121837.0 |
| orotidine-5'-phosphate decarboxylase | YT1_RS14105 | Not Available | Positive | 2792758 - 2793582 | 27975.5 |
| integration host factor, actinobacterial type | YT1_RS14110 | Not Available | Positive | 2793994 - 2794314 | 11688.3 |
| guanylate kinase | YT1_RS14115 | Not Available | Positive | 2794382 - 2795029 | 23390.4 |
| dna-directed rna polymerase subunit omega | YT1_RS14120 | Not Available | Positive | 2795026 - 2795328 | 10920.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


