Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS02140 | Not Available | Positive | 238047 - 238526 | 16344.7 |
| heavy-metal-associated domain-containing protein | YT1_RS02145 | Not Available | Negative | 238871 - 239137 | 8598.12 |
| duf2892 domain-containing protein | YT1_RS02150 | Not Available | Positive | 239362 - 239607 | 8193.39 |
| membrane protein | YT1_RS27075 | Not Available | Positive | 239604 - 239855 | 8794.04 |
| heavy metal translocating p-type atpase | YT1_RS02155 | Not Available | Positive | 239988 - 242438 | 86116.0 |
| phosphoketolase | YT1_RS02160 | Not Available | Positive | 242491 - 244929 | 91388.0 |
| blai/meci/copy family transcriptional regulator | YT1_RS02175 | Not Available | Positive | 246533 - 246895 | 13792.3 |
| m56 family metallopeptidase | YT1_RS02180 | Not Available | Positive | 246892 - 247827 | 32408.7 |
| m23 family metallopeptidase | YT1_RS02190 | Not Available | Negative | 248759 - 249511 | 25210.6 |
| apolipoprotein n-acyltransferase | YT1_RS02195 | Not Available | Negative | 249768 - 251267 | 51773.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


