Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS13735 | Not Available | Negative | 2713442 - 2713627 | 6516.6 |
| hypothetical protein | YT1_RS13740 | Not Available | Negative | 2713719 - 2714228 | 18753.0 |
| hypothetical protein | YT1_RS13745 | Not Available | Negative | 2714367 - 2714606 | 8347.96 |
| lppp/lpre family lipoprotein | YT1_RS13750 | Not Available | Positive | 2714725 - 2715327 | 20875.2 |
| atp-binding protein | YT1_RS13755 | Not Available | Positive | 2715439 - 2717340 | 69843.5 |
| nucleoside deaminase | YT1_RS13760 | Not Available | Positive | 2717406 - 2717843 | 15635.6 |
| glutamate--cysteine ligase | YT1_RS13765 | Not Available | Negative | 2717850 - 2719019 | 41838.1 |
| hypothetical protein | YT1_RS13770 | Not Available | Negative | 2719115 - 2719525 | 14930.8 |
| ycii family protein | YT1_RS13775 | Not Available | Positive | 2719736 - 2720143 | 14779.5 |
| rna polymerase sigma factor | YT1_RS13780 | Not Available | Positive | 2720151 - 2721320 | 42324.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


