Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | YT1_RS13685 | Not Available | Negative | 2707560 - 2707997 | 16671.7 |
| protease inhibitor i42 family protein | YT1_RS13690 | Not Available | Positive | 2708141 - 2708440 | 11065.3 |
| hypothetical protein | YT1_RS13695 | Not Available | Negative | 2708427 - 2708885 | 17395.7 |
| voc family protein | YT1_RS13700 | Not Available | Positive | 2709034 - 2709417 | 13947.2 |
| merr family transcriptional regulator | YT1_RS13705 | Not Available | Negative | 2709597 - 2710598 | 35406.1 |
| heat repeat domain-containing protein | YT1_RS13710 | Not Available | Negative | 2710603 - 2711268 | 23357.6 |
| hypothetical protein | YT1_RS13715 | Not Available | Negative | 2711422 - 2711868 | 15357.2 |
| hypothetical protein | YT1_RS13720 | Not Available | Negative | 2711998 - 2712357 | 12356.8 |
| hypothetical protein | YT1_RS13725 | Not Available | Positive | 2712650 - 2713093 | 16697.5 |
| duf6308 family protein | YT1_RS13730 | Not Available | Negative | 2713138 - 2713386 | 9326.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


