Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine phosphoribosyltransferase | YT1_RS13535 | Not Available | Positive | 2675567 - 2676124 | 18934.9 |
| rela/spot family protein | YT1_RS13540 | Not Available | Positive | 2676216 - 2678522 | 85169.2 |
| peptidylprolyl isomerase | YT1_RS13545 | Not Available | Negative | 2678552 - 2679349 | 26114.9 |
| peptidylprolyl isomerase | YT1_RS13550 | Not Available | Negative | 2679462 - 2680247 | 26388.5 |
| peptidylprolyl isomerase | YT1_RS13555 | Not Available | Negative | 2680247 - 2681119 | 30159.1 |
| mbl fold metallo-hydrolase | YT1_RS13560 | Not Available | Positive | 2681287 - 2681970 | 24217.4 |
| histidine--trna ligase | YT1_RS13565 | Not Available | Positive | 2682011 - 2683285 | 45610.5 |
| hypothetical protein | YT1_RS13570 | Not Available | Positive | 2683335 - 2683916 | 20372.3 |
| hypothetical protein | YT1_RS13575 | Not Available | Positive | 2683961 - 2684668 | 25199.0 |
| hemerythrin domain-containing protein | YT1_RS13580 | Not Available | Negative | 2684801 - 2685298 | 18930.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


