Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 87 protein | YT1_RS13380 | Not Available | Negative | 2650222 - 2651529 | 48528.1 |
| alpha/beta hydrolase | YT1_RS13385 | Not Available | Negative | 2651576 - 2653132 | 52999.9 |
| cell division protein zape | YT1_RS13390 | Not Available | Positive | 2653286 - 2654302 | 36275.2 |
| gnat family n-acetyltransferase | YT1_RS13395 | Not Available | Negative | 2654345 - 2654905 | 20004.5 |
| 2-isopropylmalate synthase | YT1_RS13400 | Not Available | Positive | 2655271 - 2655783 | 17911.1 |
| Trna-gly | Not Available | Not Available | Positive | 2655889 - 2655964 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2656025 - 2656099 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2656107 - 2656182 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2656244 - 2656318 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 2656320 - 2656390 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


