Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ws/dgat/mgat family o-acyltransferase | YT1_RS13330 | Not Available | Negative | 2638698 - 2640074 | 49369.7 |
| ws/dgat/mgat family o-acyltransferase | YT1_RS13335 | Not Available | Negative | 2640181 - 2641593 | 49251.6 |
| duf3000 domain-containing protein | YT1_RS13340 | Not Available | Negative | 2641699 - 2642274 | 20171.6 |
| uroporphyrinogen decarboxylase | YT1_RS13345 | Not Available | Positive | 2642391 - 2643488 | 38848.8 |
| protoporphyrinogen oxidase | YT1_RS13350 | Not Available | Positive | 2643485 - 2644843 | 45839.0 |
| hydrogen peroxide-dependent heme synthase | YT1_RS13355 | Not Available | Positive | 2644849 - 2645544 | 26392.3 |
| molybdopterin-dependent oxidoreductase | YT1_RS13360 | Not Available | Positive | 2645676 - 2647961 | 83248.2 |
| l-lactate dehydrogenase | YT1_RS13365 | Not Available | Negative | 2648066 - 2649028 | 33260.9 |
| had family hydrolase | YT1_RS13370 | Not Available | Positive | 2649095 - 2649820 | 26506.3 |
| peptide-methionine (r)-s-oxide reductase msrb | YT1_RS13375 | Not Available | Negative | 2649783 - 2650211 | 15832.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


