Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | YT1_RS13080 | Not Available | Negative | 2583680 - 2584822 | 41320.7 |
| cysteine dioxygenase family protein | YT1_RS13085 | Not Available | Negative | 2584872 - 2585459 | 21797.4 |
| alpha/beta fold hydrolase | YT1_RS13090 | Not Available | Negative | 2585571 - 2586620 | 38612.2 |
| hypothetical protein | YT1_RS13095 | Not Available | Positive | 2586757 - 2587413 | 24212.8 |
| voc family protein | YT1_RS13100 | Not Available | Positive | 2587508 - 2587885 | 13389.6 |
| lysr family substrate-binding domain-containing protein | YT1_RS13105 | Not Available | Negative | 2587963 - 2588715 | 27392.4 |
| amidohydrolase | YT1_RS13110 | Not Available | Negative | 2588720 - 2590162 | 50677.1 |
| dead/deah box helicase | YT1_RS13115 | Not Available | Negative | 2590166 - 2592670 | 92134.8 |
| alpha/beta fold hydrolase | YT1_RS13120 | Not Available | Negative | 2592779 - 2593816 | 37725.6 |
| proteasome assembly chaperone family protein | YT1_RS13125 | Not Available | Negative | 2593999 - 2594952 | 34535.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


