Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS27265 | Not Available | Positive | 2537669 - 2537842 | 6132.78 |
| duf2156 domain-containing protein | YT1_RS12890 | Not Available | Negative | 2537855 - 2540341 | 88641.5 |
| alpha/beta hydrolase | YT1_RS12895 | Not Available | Negative | 2540338 - 2541669 | 47047.4 |
| pig-l deacetylase family protein | YT1_RS12900 | Not Available | Positive | 2541727 - 2542440 | 25353.8 |
| diacylglycerol kinase | YT1_RS12905 | Not Available | Negative | 2542422 - 2543327 | 31781.4 |
| fad-binding oxidoreductase | YT1_RS12910 | Not Available | Negative | 2543324 - 2544946 | 56321.4 |
| tetr/acrr family transcriptional regulator | YT1_RS12915 | Not Available | Positive | 2544967 - 2545584 | 22314.8 |
| glycerol-3-phosphate dehydrogenase/oxidase | YT1_RS12920 | Not Available | Positive | 2545581 - 2547128 | 52948.7 |
| alkene reductase | YT1_RS12925 | Not Available | Positive | 2547206 - 2548282 | 38268.1 |
| serine/threonine-protein kinase | YT1_RS12930 | Not Available | Positive | 2548523 - 2550058 | 53609.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


