Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr c-terminal-related transcriptional regulator | YT1_RS12745 | Not Available | Negative | 2506605 - 2509331 | 97799.0 |
| hypothetical protein | YT1_RS27260 | Not Available | Negative | 2509423 - 2509611 | 6673.74 |
| hypothetical protein | YT1_RS12750 | Not Available | Negative | 2509657 - 2509896 | 7745.32 |
| nitrate/nitrite transporter | YT1_RS12755 | Not Available | Positive | 2510193 - 2511389 | 41300.6 |
| nitrate reductase subunit alpha | YT1_RS12760 | Not Available | Positive | 2511414 - 2515130 | 136482.0 |
| nitrate reductase subunit beta | YT1_RS12765 | Not Available | Positive | 2515171 - 2516847 | 62590.4 |
| nitrate reductase molybdenum cofactor assembly chaperone | YT1_RS12770 | Not Available | Positive | 2516844 - 2517539 | 24942.7 |
| respiratory nitrate reductase subunit gamma | YT1_RS12775 | Not Available | Positive | 2517542 - 2518273 | 27260.7 |
| m16 family metallopeptidase | YT1_RS12780 | Not Available | Positive | 2518358 - 2519707 | 48011.8 |
| 4-hydroxy-tetrahydrodipicolinate reductase | YT1_RS12785 | Not Available | Positive | 2519791 - 2520546 | 26121.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


