Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-guided endonuclease insq/tnpb family protein | YT1_RS12695 | Not Available | Negative | 2495917 - 2497110 | 43445.2 |
| is200/is605 family transposase | YT1_RS12700 | Not Available | Positive | 2497136 - 2497606 | 18061.7 |
| metal-dependent transcriptional regulator | YT1_RS12705 | Not Available | Negative | 2497649 - 2498308 | 23688.1 |
| metal abc transporter permease | YT1_RS12710 | Not Available | Negative | 2498360 - 2499247 | 30951.0 |
| metal abc transporter atp-binding protein | YT1_RS12715 | Not Available | Negative | 2499244 - 2500011 | 27019.7 |
| metal abc transporter substrate-binding protein | YT1_RS12720 | Not Available | Negative | 2500008 - 2500919 | 32564.1 |
| bifunctional riboflavin kinase/fad synthetase | YT1_RS12725 | Not Available | Positive | 2501016 - 2501987 | 35099.9 |
| wax ester/triacylglycerol synthase domain-containing protein | YT1_RS12730 | Not Available | Positive | 2502036 - 2503448 | 49836.5 |
| 30s ribosomal protein s15 | YT1_RS12735 | Not Available | Positive | 2503577 - 2503846 | 10535.9 |
| polyribonucleotide nucleotidyltransferase | YT1_RS12740 | Not Available | Positive | 2504216 - 2506513 | 80955.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


